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For priority:  1 = top priority (absolutely necessary), 2 = middle priority (would be useful), 3 = low priority (only if we have time)

 

Name conventions

pENTR L1-Gene name-L2

pEXPR Promoter:Gene

Status

WordMeaning
in planningbeing designed in geneious
designedplasmid design completed in geneious
in labsomeone else in the lab has it
ordered 
in construction 
constructed 
in storage

we have it in our fridge/freezer, etc

NAMEDependency GROUPSTATUSTYPELOCATIONINITIALSCONSTRUCTED ONOBTAINED FROMPRIORITYNOTES
pEXPR hEF1a: Gmab Heavy

pENTR Gmab Heavy

 

Antibodiesdesignedexpression      
pEXPR hEF1a: Gmab Light Antibodiesdesigned expression      
pEXPR hEF1a: CD79A Antibodiesdesigned expression      
pEXPR hEF1a: CD79B Antibodiesdesigned expression      
pEXPR hEF1a: CD79A-TCS-Gal4VP16 Antibodiesdesigned expression      
pEXPR hEF1a: CD79B-TCS-Gal4VP16 Antibodiesdesigned expression      
pEXPR hEF1a: Lyn Antibodiesdesigned expression      
pEXPR PTet: Lyn-mKate Antibodiesdesigned expression      
pEXPR PTet: Syk-eYFP Antibodiesdesigned expression      
pEXPR PTet: Syk-TEV Antibodiesdesigned expression      
pEXPR PTet: eBFP AntibodiesIn Freezerexpression      
pEXPR Gal4/UAS: mKate AntibodiesIn FreezerexpressioniGEM -20CRN/AVeliaHigh 
pEXPR hEF1a: rtTA AntibodiesIn FreezerexpressioniGEM -20CRN/AVeliaHigh 
pEXPR Gal4UAS:eYFP Antibodiesin someone else's freezerexpression      
pEXPR Tre-TEVp Antibodiesin someone else's freezerexpression      
pENTR Gmab Heavy AntibodiesPlannedentry      
pENTR Gmab Light AntibodiesPlannedentry      
pENTR CD79A (pDONR223) Antibodiesin freezerentry      
pENTR CD79B (pDONR223) Antibodiesin freezerentry      
pENTR CD79A-TCS-Gal4VP16 AntibodiesPlannedentry      
pENTR CD79B-TCS-Gal4VP16 AntibodiesPlannedentry      
pENTR Lyn (pDONR223) AntibodiesIn cultureentry      
pENTR Lyn-mKate AntibodiesPlannedentry      
pENTR Syk (pDONR223)-Antibodiesin cultureentry      
pENTR Syk-eYFP AntibodiesPlannedentry      
pENTR Syk-TEV AntibodiesPlannedentry      
pENTR eBFP Antibodies?entry      
pENTR mKate Antibodies?entryiGEM -20CRN/AVeliaHigh 
pENTR rtTA Antibodies?entryiGEM -20CRN/AVeliaHigh 
pENTR eYFP Antibodies?entry      
pENTR Gal4VP16 Antibodies?

entry

      
gBlock mIgM Gmab Heavy-AntibodiesorderedgBlock     Ordered from IDT
gBlock mIgM Gmab Light-AntibodiesorderedgBlock      
           
pENTR Tre-TEVp Treatmentin the lab already       
    • pENTR L1--BACE1-eYFP--L2
 Treatmentplanned       
      • BACE1
 Treatmentto be ordered       
      • eYFP
 Treatmentin the lab already       
    • pDEST R4--R2
 Treatmentin the lab already       
pEXPR U6:mKate-miRNA(intronic) Treatmentplanned       
pEXPR U6/TRE-t(hybrid promoter):mKate-miRNA(intronic) Treatmentplanned       
Experiment 1          
  • ggDONR
 Receptorin storageplasmid+4 in iGEM roomLAKyle not sure if blue/white selection is working or not; conducted troubleshooting experiment - problem was with plates; however not sure if concentration is high enough
  • ggDONR New
 Receptorin storageplasmid+4 in iGEM roomLA-Brandon will potentially use if original ggDONR is not working; tested - gives a lot more blue colonies than original ggDONR; will pick colony to make a cell stock
  • pENTR L4-Hef1a-R1
 Receptorin labplasmid     will be used to make LilrB2 expression vector
  • pDEST
 Receptorin labplasmid     will be used to make LilrB2 expression vector
  • pEXPR Hef1a:LilrB2
 Receptorin constructionplasmid     waiting on entry vector
    • LilrB2 Entry Vector
 Receptorin constructionplasmid     ifailing to get liquid cultures to grow in order to miniprep to extract plasmid DNA
      • LilrB2 gBlock
 Receptorin storagegBlock-20 in iGEM roomLAIDT used in Golden Gate
  • PirB Expression Vector
 Receptorin construction      waiting on entry vector
    • PirB Entry Vector
 Receptorin construction      failing to get liquid cultures to grow in order to miniprep to extract plasmid DNA
      • PirB gBlock C terminus
 Receptorin storagegBlock-20 in iGEM roomLA-IDT used in Golden Gate
      • PirB gBlock N terminus
 Receptorin storagegBlock-20 in iGEM roomLA-IDT used in Golden Gate
PDONR MAV1212-miRNA sensingin storagedonor-20 in iGEM roomRRN/AJeremy GamHighOriginal Multi Assembly Vector, currently under cloning
pENTR L1_hEF1A_L2-miRNA sensingin lab?entry?RRN/AN/AHighStock in iGEM room may exist, but the one I found was empty
pENTR R1_l7ae_L4-miRNA sensingin storageentry-20 in iGEM roomRRN/AN/AHigh 
pEXPR hEF1A:l7aeMAV1212miRNA sensingdesignedexpressionN/ARRN/AN/AHigh 
pENTR R1_mKate_L4-miRNA sensingin storageentry-20 in iGEM roomRRN/AN/AHigh 
           
           
           

 

 

 

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