Long Term Goals
Building the Cell Detector Circuit
- Choose profile
- Verify sensors
- Create mathematical model
Experiments
- L7ae repression
- TAL14 repression
- TAL21 repression
- Single input sensors
- Multiple input sensors
Alzheimer's Model
- Agree on a team wide, full Alzheimer's model
Today's Agenda
How To Please Ron/Brain
- Keep updating the parts tree (include experiments)
miRNA Sensors (Theory)
- Run tuning experiments by Brian
- Get transformation code from Brian (hopefully)
miRNA Sensors (Lab Work)
- Midi prep
- pEXPR: TAL21-mKate
- Mini prep
- MAV1212-hEF1a-TAL21
- MAV1212-hEF1a-TAL14
- Low Sensor miR-144-181c
- Sequence verify
- Low Sensor miR-144-181c
- Digest and run gel
- MAV1212-hEF1a-TAL21
- MAV1212-hEF1a-TAL14
- Golden Gate (if digest works)
- All the TAL21 high sensors
- Pick colonies
- miR-30d (TAL14)
- miR-125b (TAL14)
- let-7f (TAL14)
NOTES
The midi prep for TAL21-mKate didn't work --> pick a colony and try again tomorrow
High sensor miR-146a didn't grow colonies --> retransform + replate transformation