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PROTEIN RECEPTOR GROUP


 

 

Overview: 

The plaques found in the brain of a patient with Alzheimer's disease comprise beta-amyloid protein oligomers, which are responsible for the degenerative symptoms of the condition. In order to diagnose and/or treat Alzheimer's disease, we must first be able to detect the presence of these beta-amyloid oligomers. One of the possible methods of detection is the use of beta-amyloid oligomer-specific transmembrane receptors.

Leukocyte immunoglobulin-like receptor (LilrB2) and its murine homolog Paired Immunoglobulin-like Receptor B (PirB) are trans-membrane receptors capable of selectively binding beta-amyloid oligomers (of x or more monomers). It belongs to a family of proteins that bind to MHC1 molecules on antigen presenting cells and is only expressed in monocytes and B-cells (and at lower levels in dendritic cells and natural killer cells) in humans. When beta-amyloid oligomers bind to the extracellular domain of LilrB2, it is activated and then goes on to recruit cofilin to its intracellular domain. 

In our proposed detection model, we would construct a fusion protein where a linker, TEV protease cleavage site and transcription factor (in that order) are fused to the intracellular domain of LilrB2. We would also fuse a TEV protease to cofilin. In that way, when beta-amyloid oligomers bind to the receptor, thus activating it, the TEV protease on the recruited cofilin cleaves at the cleavage site releasing the transcription factor in to the cytosol. The cleaved portion will be guided to the nucleus of the cell and will go on to activate the subsequent processing module. 

 

 

 

To Do: 

  • Troubleshoot liquid culture not growing
    • retransform (use high efficiency transformation kit)
      • regolden gate 
      • transform and plate 
    • keep track of transformation efficiency (aim for 5*10^7) 
    • if it doesn't work - add a positive control golden gate (ask Jeremy for it) 
      • look into microfluidics paper for positive control plasmids 
  • Making pEXPR for LilrB2 and PirB
    • Miniprep liquid culture for second golden gate
    • Verify DNA for both golden gates
      • run a gel
        • first golden gate
        • second golden gate
      • send for sequence
        • first golden gate
        • second golden gate
    • LR into pDEST 
  • HEK293 Transfection
    • make media
    • split cells 
    • make a plan for what controls we are going to use
    • transfect
    • measure 
    • report transfection efficiency from FACs data (aim for 60-70%)
      • look for how to optimize transfection 
  • make ggDONR cell stock 
  • make promoter cell stock
    • transform promoter DNA (wait for the remaining two promoter DNA)

 

Experiments:

GroupDescriptionExperiments Included
ATesting membrane localization of receptor proteinA1, A2,
BTesting oligomer binding to receptorsB1, B2
CTesting recruitment of cofilin 
D  
E  

 

 

 

 

 



 

 

 

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