Date | Summary |
---|
08/03 | - miniprep, digest, gel:
- CD79B-RFP-G4 1,2,3
- TRE:Syk-3-tTEVp
- CD79A-3T15-G4 1,2
- CD79A-9T15-G4 1,2
- CD79A-15T9-G4 1,2
- Midi redigests:
- Sequencing
- A3T15 #1
- A9t15 #2
- A15T9 #1
- CD79B-RFP-G4 #1
- TRE:Syk-3-tTEVp
|
08/04 | - Midi, digest, gel
- A-12T12 (good gel - bad yield -> regrew more to midi on 08/05
- Miniprep, digest, gel
- Sequencing
- Kill, transform
- Innoculate:
- A-12T12 midi
- T:S-3-tT
- T:S-6-tT
- T:S-9-tT
- T:S-12-tT
|
08/05 | - Miniprep:
- T:S-9-tT 1,2
- T:S-12-tT 1,2
- Midi:
- Sequence:
- T:S-9-tT #1
- T:S-12-tT #1
- A-3T15 #2
- A-9T15 #1
- Pick:
- Innoculate:
|
08/06 | |
08/07 | - LR TRE:Syk-15-tTEVp (pDEST 2-3)
- Miniprep, send for sequencing:
- B-3T3
- B-3T9
- B-6T6
- B-6T9
- B-9T3
- B-9T6
- B-9T12
- B-12T6
- B-12T9
- B-12T12
- B-15T3
- B-15T15
- Miniprep, digest, gel
- Midiprep, digest, gel
- Golden Gate
- hEF1a:CD79A-15T9-G4 (because even though we midi'ed it, sequencing was bad)
- TRE:Syk-linker-TEVp (3, 6, 9, 12)
- hEF1a:CD79B-3T15-G4
- hEF1a:CD79B-9T9-G4
- Pick colonies
- pENTR HyHEL10 Heavy
- hEF1a:CD79B-9T15-G4
- Restreak
- hEF1a:CD79B-6T12-G4
- hEF1a:CD79B-15T9-G4 (restreak and replate)
|
08/08 | - kill LR
- Transform:
- LR TRE:Syk-15-tTEVp
- A-15T9
- B-3T15
- B-9T9
- TRE:Syk-X-TEVp (X=3,6,9,12)
- Restreak:
- A-3T15
- B-15T15
- B-15T9
- B-6T12
|
08/09 | - Restreak/replate:
- Inoculate midis:
- B3T3
- B3T9
- B6T6
- B9T3
- B9T6
- B12T6
- inoculate minis:
- TRE:Syk-15-tTEVp -gg
- TRE:Syk-3-TEVp -gg
- TRE:Syk-6-TEVp -gg
- TRE:Syk-9-TEVp -gg
- TRE:Syk-12-TEVp -gg
- A15T9 -gg
- A3T15
- A9T15
- B3T15 -gg
|
08/10 | - Minis:
- A-3T15
- A-9T15
- A-15T9 (only one tube)
- TRE:Syk-3-TEVp
- TRE:Syk-6-TEVp
- TRE:Syk-9-TEVp
- TRE:Syk-12-TEVp
- B-3T15
- B-6T12
- B-9T15
- TRE:Syk-15-tTEVp --> digest
- pENTR HyHEL10 H
- Midis:
- B3T3
- B3T9
- B6T6
- B9T3
- B9T6
- B12T6
- Golden gate, transform:
- Sequencing:
- A-3T15 1
- A-9T15 1
- A-15T9
- TRE:Syk-3-TEVp 1
- TRE:Syk-6-TEVp 1
- TRE:Syk-9-TEVp 1
- TRE:Syk-12-TEVp 1
- B-3T15 1
- B-6T12 1
- B-9T15 1
- TRE:Syk-9-tT 2
- TRE: Syk-12-tT 2
|
08/11 | - Run gel of TRE:syk-15-tTEVp: correct, inoculate midi
- digest pENTR HyHEL10 H
- Sequencing:
- Inoculate midi:
- Inoculate mini:
- B9T9 - from plate
- A3T15 - from plate
- Restreak/replate:
- B15T9
- A9T15 - one white
- B15T15
- B9T9 - only one white
|
08/12 | - Run gel for pENTR HyHEL10 H digest
- Transform:
- Mini, sequence:
- Midi:
- inoculate midi:
- B15T3
- T:S-9-TEVp
- T:S-12-TEVp
- B9T12
- inoculate mini:
- Sequencing
- B6T12-2
- pENTR HyHEL10H-1
- A15T9-2
- B9T9 (from 8/12)
- Repeat sequencing:
- T:S-3-T 1
- T:S-6-T 1
- T:S-9-tT 2
- T:S-12-tT 2
- B3T15 1
- B9T15 1
- B12T12 2
|
08/13 | - Midis:
- Minis, sequencing
- Inoculate mini
- B15T9
- B15T15
- B12T9
- T:S-9-tT
- T:S-12-tT
- Inoculate midi:
- Sequencing:
- B6T9-1
- A9T15-2
- A3T15-2
- T:S-3-T 1
- T:S-6-T-1
|
08/14 | - Midis
- Minis, sequencing
- Order antibodies/antigens
- Finish Gaussian Distribution gating code
- Split Cells
- Inoculate mini
- Hef1a:GAL4?
- Retransform
- B9T9
- A15T9
- T:S-6-T
- B15T9
- B12T9
- Sequencing, take 1
- B9T15-2
- B3T15-1
- T:S9tT 1
- T:S12tT 1
- Sequencing, take 2
|
08/15 | - Miniprep/sequence
- B15T15 - one red, one with no growth :/
- B6T12
- B6T9
- A3T15
- Inoculate minis
- B9T9
- A15T9
- T:S-3-T
- T:S-6-T
- B12T9
- B15T15
- Analyze sequencing and go from there
|
08/16 | - Make amp plates
- Replate
- Inoculate miniprep cultures
- Inoculate midiprep culture
- A9T15
- B6T9 probably B6T12
- B6T12 probably B6T9
- Miniprep and sequence
- Spin down and store midiprep cultures
- Analyze sequencing data
|
08/17 | Send for sequencing - A3T15 #2 (8/15)
- B3T15 #1
- B9T15 #1
- Replate
- Inoculate miniprep cultures
- Inoculate midiprep culture
- Spin down and store midiprep cultures
|
08/18 | - Golden gate, transform
- A15T9
- B3T15
- B9T9
- B9T15
- B12T9
- B15T9
- Transform
- Miniprep, sequence
- Inoculate miniprep
- Spin down midiprep
|
08/19 | |
08/20 |